Bioinformatics Resource for Invertebrate Vectors of Human Pathogens
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RNA-Seq Experiment Ixodes ricinus salivary glands (Perner et al., 2018)
NameIxodes ricinus salivary glands (Perner et al., 2018)
SpeciesIxodes scapularis
Experimental factorsGrowthCondition:Time
Statistical testsANOVA
DescriptionIxodes ricinus ticks were fed on rabbit or artificial membrane to investigate sialome switching. Reads were mapped and annotated against Ixoodes scapularis due to assembly and annotation availability.
AuthorsPerner J1, Kropáčková S2, Kopáček P1, Ribeiro JMC3.
Affiliations1. Institute of Parasitology, Biology Centre of the Czech Academy of Sciences, České Budějovice, Czech Republic. 2. Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic. 3. Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, Bethesda MD, United States of America.
Accessions SRA: SRP071001
PubMed ID 29652888
Search expression data from this experiment
Genesets used
Geneset Description
Ixodes scapularis IscaW1.6 transcripts

Sequencing Runs
18 items found, displaying all items.
Name Samples
M_24_S1.s1.e1.ampl M_24_S1.s1
M_24_S2.s1.e1.ampl M_24_S2.s1
M_24_S3.s1.e1.ampl M_24_S3.s1
R_24_S10.s1.e1.ampl R_24_S10.s1
R_24_S11.s1.e1.ampl R_24_S11.s1
R_24_S12.s1.e1.ampl R_24_S12.s1
M_48_S4.s1.e1.ampl M_48_S4.s1
M_48_S5.s1.e1.ampl M_48_S5.s1
M_48_S6.s1.e1.ampl M_48_S6.s1
R_48_S13.s1.e1.ampl R_48_S13.s1
R_48_S14.s1.e1.ampl R_48_S14.s1
R_48_S15.s1.e1.ampl R_48_S15.s1
M_72_S7.s1.e1.ampl M_72_S7.s1
M_72_S8.s1.e1.ampl M_72_S8.s1
M_72_S9.s1.e1.ampl M_72_S9.s1
R_72_S16.s1.e1.ampl R_72_S16.s1
R_72_S17.s1.e1.ampl R_72_S17.s1
R_72_S18.s1.e1.ampl R_72_S18.s1
18 items found, displaying all items.